The detailed information of tRNA gene sequence


Sequence ID>W1630017437
Genome IDLSCK01000120
Search identical group
Phylum/ClassUnclassified
SpeciesCloacimonetes bacterium TCS60 [LSCK]
Start position on genome 1576
End posion on genome 1671
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acagattgag
tRNA gene sequence 
CTGAGAGGAAGGGACTGGTGTCCCAGCTGGTCTTCAAAACCAGTAGGGGGCGGATAAAAC
CGTCCGTGGCAGGTTCGATTCCTGCCCTCTCGGCCAt
Downstream region at tRNA end position 
tttttaatca
Secondary structure (Cloverleaf model)
>W1630017437	SeC(p)	TCA
                   g      CCAt tttttaatca
                     C - G
                     T + G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    A     C G T C C     A
        T C        A      | | | | |     G
      G     A G G G       G C A G G     C
      G       | |                   T T
      T     C C C A
        G T        G     TAGGGGGCGGATAAAACCGTCCGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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