The detailed information of tRNA gene sequence


Sequence ID>W1630017692
Genome IDLSSE01000050
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-2 [LSSE]
Start position on genome 9993
End posion on genome 10068
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttataaaat
tRNA gene sequence 
GCCCTGGTAGTGTAGTGGTCTATCATCCGAGCCTGTCGAGCTCGGGACTCGGATTCAAAT
TCCGGCCGGGGCGCTA
Downstream region at tRNA end position 
ttttataaaa
Secondary structure (Cloverleaf model)
>W1630017692	Asp	GTC
                   t      GCTA ttttataaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     G G C C T     A
      T G A        A      + | | | |     A
    G       T G T G       T C G G A     C
    G         | | +                 T T
    T       T C A T
      C T A        C     GGAC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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