The detailed information of tRNA gene sequence


Sequence ID>W1620001124
Genome IDLGHG01000012
Search identical group
Phylum/ClassSynergistota
SpeciesSynergistales bacterium 54_9 [LGHG]
Start position on genome 48
End posion on genome 144
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tggataaagc
tRNA gene sequence 
GGAGGCGCATGGTGACTGGTGTTGCCCGCGGGCTTCAAACCCGTCGAGGGTCTGTAAGGC
AGGCCTTGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gtttttttgt
Secondary structure (Cloverleaf model)
>W1620001124	SeC	TCA
                   c      GCCA gtttttttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C A        T      | | | | |     G
    G       G T G G       G T G G G     C
    G       + + | |                 T T
    T       T G C C
      G T          C     CGAGGGTCTGTAAGGCAGGCCTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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