The detailed information of tRNA gene sequence


Sequence ID>WENV080025
Genome IDAATO01000959
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 2150
End posion on genome 2075
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ctgccactgc
tRNA gene sequence
GGGCCTATAGCTCAACGGTTAGAGCAGAGGACTCATAATCCTTTGGTTCCAGGTTCGAAT
CCTGGTGGGCCCACCA
Downstream region at tRNA end position
agccgcaagg
Secondary structure (Cloverleaf model)
>WENV080025	Met	CAT
                   c      ACCA agccgcaagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G T C C     A
      C A A        A      | | | | |     G
    G       C T C G       C C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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