The detailed information of tRNA gene sequence


Sequence ID>WENV080027
Genome IDAATO01001055
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 923
End posion on genome 836
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtttttgca
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGACGGGCAACCGTCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gaacgacgtt
Secondary structure (Cloverleaf model)
>WENV080027	Ser	TGA
                   a      GCCA gaacgacgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGACGGGCAACCGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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