The detailed information of tRNA gene sequence


Sequence ID>WENV080029
Genome IDAATO01001134
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 2215
End posion on genome 2293
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttgcctcggT
tRNA gene sequence 
CGGGGCGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGAGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
Cttcaatcgc
Secondary structure (Cloverleaf model)
>WENV080029	Pro	CGG
                   T      ACCA Cttcaatcgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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