The detailed information of tRNA gene sequence


Sequence ID>WENV080053
Genome IDAATO01002192
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 1410
End posion on genome 1486
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaatagca
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGAG
CCCAGGTGGGCCCACAG
Downstream region at tRNA end position 
cacagataag
Secondary structure (Cloverleaf model)
>WENV080053	Met	CAT
                   a      ACAG cacagataag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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