The detailed information of tRNA gene sequence


Sequence ID>WENV080071
Genome IDAATO01003295
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 1242
End posion on genome 1168
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttaacaa
tRNA gene sequence 
ACGGGCGTAGTACAAGGGCTAGTATAGTGGTCTCCAAAACCATTGATGGGGGTTCGAATC
CCTCCGCCCGTGCAA
Downstream region at tRNA end position 
aaaataaaat
Secondary structure (Cloverleaf model)
>WENV080071	Trp	CCA
                   a      GCAA aaaataaaat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      G A A        A      | + | | |     G
    G       C A T G       G G G G G     C
    G       | | | +                 T T
    C       G T A T
      T A          A     TGAT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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