The detailed information of tRNA gene sequence


Sequence ID>WENV080073
Genome IDAATO01003303
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 1451
End posion on genome 1544
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccgtccta
tRNA gene sequence 
GGAGACGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATGCGGGCATAAACC
TGCATCAAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
ggataaacat
Secondary structure (Cloverleaf model)
>WENV080073	Ser	GCT
                   a      GCCA ggataaacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATGCGGGCATAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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