The detailed information of tRNA gene sequence


Sequence ID>WENV080096
Genome IDAATO01004797
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 1172
End posion on genome 1266
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaaggtccC
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTAAGCGTCTAAACCGC
GCTTCGGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
Aacatgctgt
Secondary structure (Cloverleaf model)
>WENV080096	Ser	GGA
                   C      GCCA Aacatgctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGCGTCTAAACCGCGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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