The detailed information of tRNA gene sequence


Sequence ID>WENV080133
Genome IDAATO01008243
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 936
End posion on genome 859
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
nccagcacgT
tRNA gene sequence
GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGCCGGTTCGATC
CCGGCTGGCTCCACCA
Downstream region at tRNA end position
Attccgccac
Secondary structure (Cloverleaf model)
>WENV080133	Ala	GGC
                   T      ACCA Attccgccac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C G G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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