The detailed information of tRNA gene sequence


Sequence ID>WENV080171
Genome IDAATO01010939
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 256
End posion on genome 167
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgatttatT
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
Gtagaaatac
Secondary structure (Cloverleaf model)
>WENV080171	Ser	TGA
                   T      GCCA Gtagaaatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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