The detailed information of tRNA gene sequence


Sequence ID>WENV081082
Genome IDABEF01026643
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 1047
End posion on genome 1142
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataacactT
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTAACCGGAGATAATC
TGGTTCGAGAGTTCGAATCTCTCCCTCTCCGCAC
Downstream region at tRNA end position 
Tttttagacg
Secondary structure (Cloverleaf model)
>WENV081082	Ser	GCT
                   T      GCAC Tttttagacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G A G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAACCGGAGATAATCTGGTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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