The detailed information of tRNA gene sequence


Sequence ID>WENV081157
Genome IDABEF01031989
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 193
End posion on genome 98
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tttacacttt
tRNA gene sequence 
GGGAATGATTGAGTGGCTGGTGCTCTCCGCGGCCTTCAAAGCCGTTGTCCCCGGTAGTCC
CGGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttgaaaaag
Secondary structure (Cloverleaf model)
>WENV081157	Sec	TCA
                   t      GCCA tttgaaaaag
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         | | |                 T T
    G       T C T C
      T G C        C     TGTCCCCGGTAGTCCCGGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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