The detailed information of tRNA gene sequence


Sequence ID>WENV081499
Genome IDABEF01049157
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 672
End posion on genome 766
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
aatcgctcct
tRNA gene sequence 
GGAAGGGAACCGTTCCCGGTGGGGCGCCTGGACTTCAAATCCAGTGAGGGGCGTTGGACG
TTCCTTGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
ttcgcctgcg
Secondary structure (Cloverleaf model)
>WENV081499	Sec	TCA
                   t      GCCA ttcgcctgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        C      | | | | |     G
    G       T T G C       G T G G G     C
    G       + + | |                 T T
    T       G G C G
      G G          C     TGAGGGGCGTTGGACGTTCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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