The detailed information of tRNA gene sequence


Sequence ID>W1720000982
Genome IDFNHP01000003
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesOryzisolibacter propanilivorax EPL6 [FNHP]
Start position on genome 229418
End posion on genome 229513
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgccgacgA
tRNA gene sequence 
GGAAGGGAAACGCCCCTGGTGGGGCGCCCGGGCTTCAAACCCGGTGGGTTGCGCCACGCG
CGGCCGGAAGGTTCGACTCCTTCTCCTTTCCGCC
Downstream region at tRNA end position 
Aaatatcagt
Secondary structure (Cloverleaf model)
>W1720000982	SeC	TCA
                   A      CGCC Aaatatcagt
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T C
                    A     C T T C C     A
      C C C        A      | | | | |     G
    T       C G C A       G A A G G     C
    G       |                       T T
    G       G G C G
      T G G        C     TGGGTTGCGCCACGCGCGGCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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