The detailed information of tRNA gene sequence


Sequence ID>W1720002812
Genome IDMFNB01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Lambdaproteobacteria bacterium RIFOXYC1_FULL_56_13 [MFNB]
Start position on genome 1131
End posion on genome 1033
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttcccctgg
tRNA gene sequence 
GGAGGCGGCAGTGGTGCTGGTGCCCACCCCGGTCTTCAAAACCGAGCGAGGGAGCTGTAA
AAGCCCCCTGGAGAGTTCGATTCTCTCACGCCTCCGCCA
Downstream region at tRNA end position 
actgcctacc
Secondary structure (Cloverleaf model)
>W1720002812	SeC	TCA
                   g      GCCA actgcctacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    C     C T C T C     A
      C G T        A      | | | | |     G
    T       G G T G       G A G A G     C
    G       | | | |                 T T
    G       C C A C
      T G C        C     GCGAGGGAGCTGTAAAAGCCCCCTG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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