The detailed information of tRNA gene sequence


Sequence ID>W1720002871
Genome IDMHDZ01000033
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium GWC2_57_13 [MHDZ]
Start position on genome 54870
End posion on genome 54772
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tctacagaac
tRNA gene sequence 
GGGAGAGCGTACGGAGCTGGTGCCCGTCCCGGACTTCAAATCCGTTGTTCCTCAGCCTGC
GCTGGGGAAGGTGAGTTCGATTCTCATGCTCTCCCGCCA
Downstream region at tRNA end position 
acaaaaaaaa
Secondary structure (Cloverleaf model)
>W1720002871	SeC	TCA
                   c      GCCA acaaaaaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T T
                    G     T A C T C     A
      C G A        T      + | | | |     G
    T       G G C A       G T G A G     C
    G       | | | |                 T T
    G       C C G T
      T G C        C     TGTTCCTCAGCCTGCGCTGGGGAAG
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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