The detailed information of tRNA gene sequence


Sequence ID>W1720002873
Genome IDMHEB01000142
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium GWD2_44_7 [MHEB]
Start position on genome 3559
End posion on genome 3656
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcatcacatt
tRNA gene sequence 
GGGAGTGCATAGGGTTCTGGTGTCCCTCCCGGCCTTCAAAGCCGGTGTTTCCGGCCACAA
ACCGGAAGGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
ttaaacttct
Secondary structure (Cloverleaf model)
>W1720002873	SeC	TCA
                   t      GCCA ttaaacttct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      C T T        T      | | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G T        C     TGTTTCCGGCCACAAACCGGAAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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