The detailed information of tRNA gene sequence


Sequence ID>W1720003033
Genome IDMNWS01000133
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Marinimicrobia bacterium CG1_02_48_14 [MNWS]
Start position on genome 14730
End posion on genome 14638
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaacaccat
tRNA gene sequence 
GGGAATGCTTGTTGCCCGGTGGTTGCCGCAGCCTTCAAAGCTGTTGTATTGGTGAAAAAC
CAATAGATAGGTTCGACTCCTATGCATTCCCGCtt
Downstream region at tRNA end position 
gataaaacag
Secondary structure (Cloverleaf model)
>W1720003033	SeC	TCA
                   t      GCtt gataaaacag
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     C - G          T C
                    T     T A T C C     A
      C C C        T      | | | | |     G
    G       G T T G       A T A G G     C
    G       +   + |                 T T
    T       T T G C
      G G          C     TGTATTGGTGAAAAACCAATAG
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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