The detailed information of tRNA gene sequence


Sequence ID>W1720003869
Genome IDNFJC01000004
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio sp. An276 [NFJC]
Start position on genome 80442
End posion on genome 80535
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttctaatgc
tRNA gene sequence 
GGAGACGTTTCGTCACCGGTGTGGCGCCCAGTCTTCAAAACTGGTGGCAGGCTGAGAGGT
CTGCGGTAGGTTCGACCCCTATGCGTCTCCGCCA
Downstream region at tRNA end position 
aaagcacaca
Secondary structure (Cloverleaf model)
>W1720003869	SeC	TCA
                   c      GCCA aaagcacaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     T + G          C C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGCAGGCTGAGAGGTCTGCG
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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