The detailed information of tRNA gene sequence


Sequence ID>W1710015580
Genome IDAQQU01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOceanicola sp. 22II-s10i [AQQU]
Start position on genome 34182
End posion on genome 34099
Amino Acid Pseudo
Anticodon GTA
Upstream region at tRNA start position 
gcgcctgtca
tRNA gene sequence 
GGGCGACGAGCTGCAAGGTGCGGCAGCGGACTGTAACTCCGCCGGGGAGACCCATGCCTG
GTTCGATTCCAGGGTCGCCCACCA
Downstream region at tRNA end position 
ctccccccaa
Secondary structure (Cloverleaf model)
>W1710015580	Pseudo	GTA
                   a      ACCA ctccccccaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          T T
                    G     G G A C C     A
        A C        A      | | | | |     G
      A     G T C G       C C T G G     C
      G     | + | |                 T T
      G     C G G C
        T G        A     CGGGGAGACCCATG
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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