The detailed information of tRNA gene sequence


Sequence ID>W1710043531
Genome IDBBCX01000001
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio aggregans JCM 13213 [BBCX]
Start position on genome 29417
End posion on genome 29332
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cttaaatata
tRNA gene sequence 
GCCGGAGTGGCGGAACTGGTAGACGCAAGGGACTTAAAATCCCTCGGAGGGCGACCTCCG
TACGAGTTCGAGTCTCGTCTCCGGCAttt
Downstream region at tRNA end position 
atttttgtct
Secondary structure (Cloverleaf model)
>W1710043531	Leu	TAA
                   a      Attt atttttgtct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C T C     A
      C A A        G      | | | | |     G
    T       G G C G       A C G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGAGGGCGACCTCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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