The detailed information of tRNA gene sequence


Sequence ID>W1710548243
Genome IDFODP01000021
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodospirillales bacterium URHD0017 [FODP]
Start position on genome 116969
End posion on genome 116895
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgccccttcc
tRNA gene sequence 
GGGCGCTTAGCTCAGCGGGAGAGCACACCCTTCACACGGGTGGGGTCGTAGGTTCAATCC
CTACAGCGCCCACCA
Downstream region at tRNA end position 
ttgcccgtgc
Secondary structure (Cloverleaf model)
>W1710548243	Val	CAC
                   c      ACCA ttgcccgtgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C T
                    T     C A T C C     A
        G A        A      | | | | |     A
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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