The detailed information of tRNA gene sequence


Sequence ID>W1710563989
Genome IDFOQD01000016
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomicrobium piriforme [FOQD]
Start position on genome 28144
End posion on genome 28057
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgcgagccc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGCTGATTGTGCCGGTCTCGAAAACCGGTGTGCCCGAAAGGGTA
CCGAGGGTTCAAATCCCTCCCTCTCCGCtt
Downstream region at tRNA end position 
ttgcattctg
Secondary structure (Cloverleaf model)
>W1710563989	Ser	CGA
                   c      GCtt ttgcattctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G       + | | +                 T T
    C       T T G T
      T G A        G     TGTGCCCGAAAGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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