The detailed information of tRNA gene sequence


Sequence ID>W133003905
Genome IDASLA01000015
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium SCGC AAA252-B19 OP3 bacterium SCGC AAA252-B19 [ASLA]
Start position on genome 5800
End posion on genome 5727
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatggaaaag
tRNA gene sequence 
GGCGCGGTGGCCGAGAAGATAGGCAGCGGTCTGCAAAATCGCGTACACCGGTGCGAATCC
GGTCCGCGCCTCCA
Downstream region at tRNA end position 
ccaacctcgt
Secondary structure (Cloverleaf model)
>W133003905	Cys	GCA
                   g      TCCA ccaacctcgt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G G C C     A
        G A        G      | | | | |     G
      A     G C C G       A C C G G     C
      A       | | |                 T G
      G     A G G C
        A T        A     GTAC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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