The detailed information of tRNA gene sequence


Sequence ID>W132000215
Genome IDASML01000012
Search identical group
Phylum/ClassUnclassified
SpeciesBRC1 bacterium SCGC AAA257-C11 BRC1 bacterium SCGC AAA257-C11 [ASML]
Start position on genome 810
End posion on genome 901
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
aattaatatc
tRNA gene sequence 
gGAGGTGAGAGGGGTCCGGTGACTCCCGCGGCCTTCAAAGCCGTCTGTGTCGCGCTGTCG
CGTGACAAGTGGGTTCGACTCCCATTCACCTCCgcca
Downstream region at tRNA end position 
tctttatcga
Secondary structure (Cloverleaf model)
>W132000215	seC	TCA
                   c      gcca tctttatcga
                     g - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T          T C
                    G     T A C C C     A
      C C T        A      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G A          C     CTGTGTCGCGCTGTCGCGTGACAA
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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