The detailed information of tRNA gene sequence


Sequence ID>W132000251
Genome IDASZK01000044
Search identical group
Phylum/ClassUnclassified
SpeciesMarinimicrobia bacterium JGI 0000039-D08 [ASZK]
Start position on genome 5361
End posion on genome 5453
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
aaataattat
tRNA gene sequence 
GGGAATGAATGCCATCCCGGTGGAGGCCGCGGTCTTCAAAATCGTCGTCTTGCCTATGGG
CAAGAGCTGGGTTCGACTCCCAGGCGTTCCCGCaa
Downstream region at tRNA end position 
attcaacctt
Secondary structure (Cloverleaf model)
>W132000251	seC	TCA
                   t      GCaa attcaacctt
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C T        T      | | | | |     G
    C       A C C G       C T G G G     C
    G         | | |                 T T
    G       A G G C
      T G G        C     CGTCTTGCCTATGGGCAAGAG
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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