The detailed information of tRNA gene sequence


Sequence ID>W132000265
Genome IDATXI01000023
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfobacterium thermophilum DSM 1276 [ATXI]
Start position on genome 8402
End posion on genome 8310
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
attaaaatca
tRNA gene sequence 
GGAGGCGTGAGGGGGCTGGTGCCTCTCCCGGGCTTCAAACCCGGTGCACCCCAAAAAGGG
GTGGGTGGGTTCAATTCCCATACGCCTCCGCCA
Downstream region at tRNA end position 
aagaaccttt
Secondary structure (Cloverleaf model)
>W132000265	seC	TCA
                   a      GCCA aagaaccttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     T A C C C     A
      T C G        A      + | | | |     A
    G       G G G G       G T G G G     C
    G       | + | +                 T T
    T       C T C T
      G C          C     TGCACCCCAAAAAGGGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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