The detailed information of tRNA gene sequence


Sequence ID>W1710705632
Genome IDLDIX01000001
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium UASB340 [LDIX]
Start position on genome 130933
End posion on genome 130858
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatattttaT
tRNA gene sequence 
CGCGGGGTAGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCTGGTTCAAA
TCCAGCCCCCGNNNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>W1710705632	Met	CAT
                   T      NNnn nnnnnnnnnn
                     C   N
                     G   N
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        A      | | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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