The detailed information of tRNA gene sequence


Sequence ID>W1710705646
Genome IDLDIX01000002
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium UASB340 [LDIX]
Start position on genome 66810
End posion on genome 66733
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gattaaatat
tRNA gene sequence 
GTCCCCATCGTCTAGCCCGGTCTAGGACACAAGATTCTCATTCTTGTAACAGGGGTTCGA
ATCCCCTTGGGGACGCCA
Downstream region at tRNA end position 
gtcttcgctt
Secondary structure (Cloverleaf model)
>W1710705646	Glu	CTC
                   t      GCCA gtcttcgctt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     TAAC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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