The detailed information of tRNA gene sequence


Sequence ID>W135006041
Genome IDASPJ01000007
Search identical group
Phylum/ClassUnclassified
SpeciesMarinimicrobia bacterium SCGC AAA003-L08 [ASPJ]
Start position on genome 42570
End posion on genome 42476
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
gaataattaa
tRNA gene sequence 
GGAAGTGAATATGATCCTGGTGGACATCACGGCCTTCAAAGCCGTTGAGTGGTAGTGATA
TCACTGGTGGATTCGATTTCCACGCACTTCCGCCA
Downstream region at tRNA end position 
tttaaaaaga
Secondary structure (Cloverleaf model)
>W135006041	seC	TCA
                   a      GCCA tttaaaaaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     A   G          T T
                    A     C A C C T     A
      C C T        T      | | | | |     G
    T       A G T A       G T G G A     C
    G         | | |                 T T
    G       A C A T
      T G G        C     TGAGTGGTAGTGATATCACTG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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