The detailed information of tRNA gene sequence


Sequence ID>W1710713687
Genome IDLDXQ01000103
Search identical group
Phylum/ClassArmatimonadota
SpeciesArmatimonadetes bacterium CSP1-3 [LDXQ]
Start position on genome 5607
End posion on genome 5514
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tagggtccac
tRNA gene sequence 
GGAGGGCAGTGTTCGCTGGTGCGGGCCCCGGTCTTCAAAACCGGTGGGAGGCCAGGCGGT
CTCCGGTGGGTTCGATTCCCACGGCCCTCCGCCA
Downstream region at tRNA end position 
cagtagggga
Secondary structure (Cloverleaf model)
>W1710713687	SeC(p)	TCA
                   c      GCCA cagtagggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A   G          T T
                    G     C A C C C     A
      T C G        T      | | | | |     G
    G       C T T G       G T G G G     C
    G       | + + |                 T T
    T       G G G C
      G C          C     TGGGAGGCCAGGCGGTCTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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