The detailed information of tRNA gene sequence


Sequence ID>W1710713716
Genome IDLDXR01000003
Search identical group
Phylum/ClassUnclassified
Speciescandidate division NC10 bacterium CSP1-5 [LDXR]
Start position on genome 198295
End posion on genome 198389
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggaaccaat
tRNA gene sequence 
GGAGAGGTGGCCGAGCCAGGCTGAAGGCAGCCGCCTGCTAAGCGGTTGTGGGGTGTTGAG
CCCTACCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
tgtcttattg
Secondary structure (Cloverleaf model)
>W1710713716	Ser	GCT
                   t      GCCA tgtcttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     G
  A         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        A     TGTGGGGTGTTGAGCCCTACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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