The detailed information of tRNA gene sequence


Sequence ID>A171000809
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 708838
End posion on genome 708913
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgctcaccT
tRNA gene sequence 
GGGCCAATAGCTCAGTCAGGTTGAGCGCTCGGCTGATAACCGGGAGGCCCGCGGTTCAAA
TCCGCGTTGGCCCATgc
Downstream region at tRNA end position 
ccaggacggc
Secondary structure (Cloverleaf model)
>A171000809	Ile	GAT
                   T      ATgc ccaggacggc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G C G C C     A
      T G A        A      | | | | |     A
    C       C T C G       C G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGCC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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