The detailed information of tRNA gene sequence


Sequence ID>A171001179
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 2284809
End posion on genome 2284735
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgcttacct
tRNA gene sequence 
GGGCCAATAGCTCAGTCAGGTTGAGCGCTCGGCTGATAACCGGGAGGCCCGCGGTTCAAA
TCCGCGTTGGCCCACtc
Downstream region at tRNA end position 
acatcggtaa
Secondary structure (Cloverleaf model)
>A171001179	Ile	GAT
                   t      ACtc acatcggtaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G C G C C     A
      T G A        A      | | | | |     A
    C       C T C G       C G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGCC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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