The detailed information of tRNA gene sequence


Sequence ID>C008439
Genome IDCP000468
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli APEC O1 [CP000468]
Start position on genome 3116457
End posion on genome 3116533
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtacggtga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
atttattaga
Secondary structure (Cloverleaf model)
>C008439	Met	CAT
                   a      ACCA atttattaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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