The detailed information of tRNA gene sequence


Sequence ID>C010959
Genome IDCP000436
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHistophilus somni [CP000436]
Start position on genome 261158
End posion on genome 261233
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
caaacaatga
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGAAGGTTCGAAT
CCTTCACGACCCACCA
Downstream region at tRNA end position 
ttttatttgt
Secondary structure (Cloverleaf model)
>C010959	Lys	TTT
                   a      ACCA ttttatttgt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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