The detailed information of tRNA gene sequence


Sequence ID>C010978
Genome IDCP000436
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHistophilus somni [CP000436]
Start position on genome 1944327
End posion on genome 1944402
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aagtgtatgt
tRNA gene sequence 
GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTATCTCCACCA
Downstream region at tRNA end position 
aattacgcca
Secondary structure (Cloverleaf model)
>C010978	Ala	TGC
                   t      ACCA aattacgcca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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