The detailed information of tRNA gene sequence


Sequence ID>C011913
Genome IDAE017198
Search identical group
Phylum/ClassBacillota
SpeciesLactobacillus johnsonii NCC 533 [AE017198]
Start position on genome 1317009
End posion on genome 1316937
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttcctagtct
tRNA gene sequence 
GGCTCGTTGGTCAAGTGGTTTAAGACACTGGTTTTTCATACCAGTAACACAAGTTCGATT
CTTGTACGAGCTAtgg
Downstream region at tRNA end position 
gaattaatag
Secondary structure (Cloverleaf model)
>C011913	Glu	TTC
                   t      Atgg gaattaatag
                     G + T
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T G T T C     A
      T G A        G      | | | | |     G
    G       A C T G       A C A A G     C
    G         | | |                 T T
    T       A G A C
      T T A        A     TAAC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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