The detailed information of tRNA gene sequence


Sequence ID>C013117
Genome IDAE016958
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium avium subsp. paratuberculosis K-10 [AE016958]
Start position on genome 687219
End posion on genome 687295
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcagcagcaa
tRNA gene sequence 
GGCCCTGTGGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCAGGGTCGCCA
Downstream region at tRNA end position 
gcgcggcgag
Secondary structure (Cloverleaf model)
>C013117	Asp	GTC
                   a      GCCA gcgcggcgag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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