The detailed information of tRNA gene sequence


Sequence ID>C027179
Genome IDAE003849
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXylella fastidiosa 9a5c [AE003849]
Start position on genome 615973
End posion on genome 615886
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacagttgta
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGCAACCGTTC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
ataaaaacaa
Secondary structure (Cloverleaf model)
>C027179	Ser	TGA
                   a      GCCA ataaaaacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGCAACCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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