The detailed information of tRNA gene sequence


Sequence ID>C09104521
Genome IDFM180568
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O127:H6 str. E2348/69 [FM180568]
Start position on genome 1442730
End posion on genome 1442805
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctgcgccc
tRNA gene sequence 
GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT
CCAGCAAGGGCCACCA
Downstream region at tRNA end position 
accgccacta
Secondary structure (Cloverleaf model)
>C09104521	Met	CAT
                   c      ACCA accgccacta
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      G A          G     AGGTC
                    A   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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