The detailed information of tRNA gene sequence


Sequence ID>C11102099
Genome IDCP002301
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesBuchnera aphidicola str. TLW03 [Acyrthosiphon pisum] [CP002301]
Start position on genome 505177
End posion on genome 505101
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaatacagg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
atatattaaa
Secondary structure (Cloverleaf model)
>C11102099	Met	CAT
                   g      ACCA atatattaaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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