The detailed information of tRNA gene sequence


Sequence ID>C11109938
Genome IDCP002725
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis HMP9231 [CP002725]
Start position on genome 1180952
End posion on genome 1180878
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttggaagcct
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA
TCCTGTCACCCCGACtt
Downstream region at tRNA end position 
ttttgtattc
Secondary structure (Cloverleaf model)
>C11109938	Pro	TGG
                   t      ACtt ttttgtattc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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