The detailed information of tRNA gene sequence


Sequence ID>C11110550
Genome IDFQ312002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHaemophilus parainfluenzae T3T1 [FQ312002]
Start position on genome 434464
End posion on genome 434389
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taataccaat
tRNA gene sequence 
AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGC
CTCTCCGCCCCTGCCA
Downstream region at tRNA end position 
ttttaaaccc
Secondary structure (Cloverleaf model)
>C11110550	Trp	CCA
                   t      GCCA ttttaaaccc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G A G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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