The detailed information of tRNA gene sequence


Sequence ID>C11117964
Genome IDCP001796
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas sp. SM9913 [CP001796, CP001797]
Start position on genome 1164425
End posion on genome 1164501
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgaaaatgc
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
cttgttattt
Secondary structure (Cloverleaf model)
>C11117964	Asp	GTC
                   c      GCCA cttgttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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