The detailed information of tRNA gene sequence


Sequence ID>C11200008
Genome IDCP002986
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesStenotrophomonas maltophilia JV3 [CP002986]
Start position on genome 3660929
End posion on genome 3661024
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgtactttc
tRNA gene sequence 
GGAAGGCATGCGCATCCGGGCATGCGGCTGGGCTTCAAACCCAGTAGGGGGCGTCGATCG
TTCCCTGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
ttcgtgtttc
Secondary structure (Cloverleaf model)
>C11200008	SeC	TCA
                   c      GCCA ttcgtgtttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        G      | + | | |     G
    G       A C G C       G T A G G     C
    G       | | | |                 T T
    G       T G C G
      C A          G     TAGGGGGCGTCGATCGTTCCCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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