The detailed information of tRNA gene sequence


Sequence ID>C121000700
Genome IDAP012278
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechocystis sp. PCC 6803 substr. PCC-P [AP012278]
Start position on genome 1328264
End posion on genome 1328189
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgaaaaaccT
tRNA gene sequence 
GGGTCTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCAGACCCGTta
Downstream region at tRNA end position 
aaagagagca
Secondary structure (Cloverleaf model)
>C121000700	Asp	GTC
                   T      GTta aaagagagca
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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