The detailed information of tRNA gene sequence


Sequence ID>C121006048
Genome IDCP003109
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O55:H7 str. RM12579 [CP003109]
Start position on genome 5229938
End posion on genome 5229852
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctcgcactgg
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTG
GGGGTTCAAGTCCCCCCCCTCGCACCA
Downstream region at tRNA end position 
aacgaggcga
Secondary structure (Cloverleaf model)
>C121006048	Leu	CAG
                   g      ACCA aacgaggcga
                     G - C
                     C - G
                     G - C
                     A - T
                     A   C
                     G - C
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCTTACGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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